Chromatography is one of the most powerful organic techniques used for separating and purifying both solid and liquid compounds.  Originally discovered by a Russian botanist named Mikhail Tswett, the separation of the colored pigments of plant material was achieved using paper strips.  For more information on the theory of chromatography read Chapter 27of the OCLSM or consult the web site.

There are many variations of chromatography being used by organic chemists today.  You will carry out a variation of Tswett’s original experiment using column chromatography.  Here a solid adsorbent (the stationary phase) is eluted with a liquid (the mobile phase) to separate the components of the mixture.  Chapter 29 of the OCLSM or this website covers this type of chromatography quite thoroughly.

You will then attempt to make some analytical decisions about your column chromatography experiment.  The  technique called thin-layer chromatography (Chapter 28, OCLSM) will allow you to draw some conclusions about the polarity, purity, and identity of the components of the spinach extract.

Although these two methods have several different purposes, the theoretical basis of chromatography is present in both.  Their power to you, the organic chemist, makes them very valuable techniques to master.


adding sand to the column   collecting the first fraction  concentrating collected fractions  developing plates  


Goal: The goal of this experiment is to separate a spinach extract into some of its individual components using column chromatography.  You will also perform some analytical calculations on the separated molecules using TLC.


Procedure: Column Chromatography


Note: You should carry out this experiment in groups of 3 or 4. The following method of packing a column is called dry packing.  Sometimes it is preferred to slurry pack a column.  Your instructor will inform you as to the method you are to use.


1.  First prepare your column as follows: Push a small plug (about 1/4 of an inch thick) of cotton to the bottom of the column with a glass rod.  NOTE: Too much cotton will cause the column to run too slowly.   Next fill the column about one-half to three-quarters full with either ligroin or petroleum ether.  Through a dry funnel, introduce enough sand to form a 1 cm layer over the cotton and level the surface of the sand by tapping the column gently.  Through a funnel add slowly, with tapping, 11 g of alumina to the column.  When most of the alumina has settled, wash down any alumina that may be adhering to the walls of the column with additional ligroin or petroleum ether.  Make sure that the alumina forms a nice, smooth column and that it contains no bubbles or channels.  (These can sometimes be removed by gently tapping the column with a piece of rubber tubing.)  When all of the alumina has settled, add a little more sand to form an even protective layer on top.  Finally, open the stopcock of the column and permit the solvent to pass through the column into a beaker, leaving a small  amount of solvent above the  sand layer.  NEVER LET A COLUMN RUN DRY!  Your column is now ready to use.


2. Prepare 50 mL of 9:1 ligroin/acetone.


3. Open the stopcock and allow the liquid to become level with the upper layer of sand.  Now your instructor will add about 2mL of the spinach pigment to your column.  Load the spinach pigment onto the column by opening the stopcock.   You should stop when the spinach pigment is level with the sand.  Add  3-5 mL of (9:1) ligroin/acetone, and once again open the stopcock until the solution is just above the sand.  This will cause the spinach extract to concentrate on the alumina layer.  Now you are ready to elute the column.


4. Elute the column with the 9:1 ligroin:acetone solution to “wash out” the first fraction.  Add enough eluent to move the orange-yellow carotenes and gray pheophytins through the column.  Collect this fraction in a 50 ml beaker.  Collect only the colored portion of the eluant in this beaker.  The rest of the eluant can be collected in other glassware and disposed of according to your instructor.


5. Prepare 50 mL of a (1:1) mixture of acetone:ligroin and elute the column with this mixture.  Collect the green eluent in a 50 mL beaker.  This should remove the various chlorophyll molecules from the spinach pigment.


6. Finally elute the column with absolute methanol to remove the most polar plant pigments from the column.  Collect these in a clean 50mL beaker.


7. DO NOT DISCARD ANY OF YOUR FRACTIONS!


8. Consult with your instructor for the proper procedures for cleaning up your column.




Procedure: Thin Layer Chromatography


1. Concentrate the three fractions from your column experiment.  Add a boiling chip to each and evaporate the solvent on a gentle steam bath.


2. Add one or two drops of 3% 1-butanol in ligroin to each fraction to form a concentrated sample.


3. Obtain a precut silica gel TLC plate from your instructor.


4. Using a pencil draw a line approximately 1/4 inch from the bottom of the plate.  This will be called the origin.


5. Use a capillary spotter (page 223, OCLSM) to apply each of your fractions and the original spinach extract to the plates at the origin.  Repeated applications of the analytes may be necessary. Your plate should look like this:


sample TLC plate


6. Develop your plate using the recommended solvent system.  See page 226 of the OCLSM for the construction of a developing chamber. You will need to use a 400 mL beaker as a chamber.


7. After development is complete, calculate the Rf values for your fractions and the original spinach sample.




Chemical Information
Name Structure (2-D)
ligroine
acetone acetone
carotene see below
chlorophyll-a see below
methanol methanol
alumina
1-butanol 1-butanol



beta-Carotene

carotene




Chlorophyll-a

chlorophyll-a




3-D view Chlorophyll-a

3-D chlorophyll-a