HEF version 1.1.1 generated by SimWalk2 2.91
Episodic Ataxia (EA) pedigree: Haplotype
0 : Name of chromosome in this file (0 = unknown)
9 marker loci in this file
Marker Map: Haldane-cM Number of Allele Names and
Name Female Male Alleles Frequencies
S91 0.00 0.00 6
1 0.187 2 0.090 3 0.306 4 0.336
5 0.067 6 0.015
S100 1.01 1.01 6
1 0.060 2 0.313 3 0.351 4 0.090
5 0.075 6 0.112
CACNL1A1 2.02 2.02 7
1 0.014 2 0.007 3 0.014 4 0.063
5 0.655 6 0.218 7 0.028
S372 5.11 5.11 5
1 0.056 2 0.211 3 0.394 4 0.232
5 0.106
pY2/1 8.21 8.21 7
1 0.089 2 0.205 3 0.247 4 0.075
5 0.055 6 0.253 7 0.075
pY21/1 9.22 9.22 9
1 0.014 2 0.107 3 0.300 4 0.250
5 0.064 6 0.064 7 0.136 8 0.036
9 0.029
KCNA5 10.23 10.23 5
1 0.062 2 0.125 3 0.297 4 0.234
5 0.281
S99 11.24 11.24 8
1 0.064 2 0.021 3 0.150 4 0.150
5 0.079 6 0.250 7 0.200 8 0.086
S93 12.25 12.25 7
1 0.269 2 0.269 3 0.138 4 0.185
5 0.015 6 0.077 7 0.046
1 pedigrees in this analysis
Pedigree Name, ID Father Mother Sex Trait Alleles Source Data
Num. of Individuals Pheno Pat Mat Pat Mat Pat Mat
and Pedigree Score
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20(ped#001;run#11)
29 individuals
-147.386
1 1001 1000 1 2*
1 3 1 2 1 1
3 6 1 2 1 1
5 6 1 2 1 1
5 3 1 2 1 1
6 2 1 2 1 1
3 7 1 2 1 1
3 2 1 2 1 1
1 3 1 2 1 1
6 4 1 2 1 1
1001 0 0 1 1
1 3 0 0 1 1
3 3 0 0 1 1
5 5 0 0 1 1
5 4 0 0 1 1
6 6 0 0 1 1
3 4 0 0 1 1
3 4 0 0 1 1
1 5 0 0 1 1
6 6 0 0 1 1
1000 2002 2001 2 2*
1 3 2 1 1 1
4 6 2 1 1 1
6 6 2 1 1 1
2 3 2 1 1 1
1 2 2 1 1 1
7 7 2 1 1 1
3 2 2 1 1 1
6 3 2 1 1 1
7 4 2 1 1 1
100 1001 1000 1 1
1 1 1 1 1 1
3 4 1 1 1 1
5 6 1 1 1 1
5 2 1 1 1 1
6 1 2 1 1 1
4 7 2 1 1 1
3 3 1 1 1 1
1 6 1 1 1 1
6 7 1 1 1 1
2002 0 0 1 1
1 1 0 0 1 1
1 4 0 0 1 1
5 6 0 0 1 1
2 2 0 0 1 1
5 1 0 0 1 1
5 7 0 0 1 1
4 3 0 0 1 1
4 6 0 0 1 1
4 7 0 0 1 1
2001 0 0 2 unknown
3 2 0 0 1 1
6 5 0 0 1 1
6 3 0 0 1 1
3 2 0 0 1 1
2 1 0 0 1 1
7 9 0 0 1 1
2 4 0 0 1 0
3 5 0 0 1 1
4 4 0 0 0 0
1002 2002 2001 1 1
1 2 2 2 1 1
4 5 2 2 1 1
6 3 2 2 1 1
2 2 2 2 1 1
1 1 2 2 1 1
7 9 2 2 1 1
3 4 2 2 1 1
6 5 2 2 1 1
7 4 2 2 1 1
1006 2002 2001 2 2*
1 3 2 1 1 1
4 6 2 1 1 1
6 6 2 1 1 1
2 3 2 1 1 1
1 2 2 1 1 1
7 7 2 1 1 1
3 2 2 1 1 1
6 3 2 1 1 1
7 4 2 1 1 1
1007 0 0 1 1
3 3 0 0 1 1
4 6 0 0 1 1
1 4 0 0 1 1
2 3 0 0 1 1
6 0 0 0 1 0
4 7 0 0 1 1
2 4 0 0 1 1
3 6 0 0 1 1
4 3 0 0 1 1
1008 2002 2001 2 2*
1 3 1 1 1 1
1 6 1 1 1 1
5 6 1 1 1 1
2 3 1 1 1 1
5 2 1 1 1 1
5 7 1 1 1 1
4 2 1 1 1 1
4 3 1 1 1 1
4 4 1 1 1 1
1009 0 0 1 1
2 1 0 0 1 1
3 3 0 0 1 1
2 5 0 0 1 1
3 2 0 0 1 1
1 1 0 0 1 1
5 4 0 0 1 1
1 2 0 0 1 1
2 5 0 0 1 1
2 1 0 0 1 1
199 0 0 2 1
0 0 0 0 0 0
0 0 0 0 0 0
5 6 0 0 1 1
3 4 0 0 1 1
2 5 0 0 1 1
4 8 0 0 1 1
0 0 0 0 0 0
4 4 0 0 1 1
0 0 0 0 0 0
1010 2002 2001 2 2*
1 3 1 1 1 1
1 6 1 1 1 1
5 6 1 1 1 1
2 3 1 1 1 1
5 2 1 1 1 1
5 7 1 1 1 1
4 2 1 1 1 1
4 3 1 1 1 1
4 4 1 1 1 1
1011 0 0 1 1
3 3 0 0 0 0
4 2 0 0 1 1
4 5 0 0 1 0
3 3 0 0 0 0
6 1 0 0 1 1
5 4 0 0 1 1
4 1 0 0 1 1
4 3 0 0 1 1
4 4 0 0 0 0
102 1001 1000 1 2*
3 3 2 2 1 1
3 6 2 2 1 1
5 6 2 2 1 1
4 3 2 2 1 1
6 2 2 2 1 1
4 7 2 2 1 1
4 2 2 2 1 1
5 3 2 2 1 1
6 4 2 2 1 1
103 0 0 2 1
1 2 0 0 1 1
3 2 0 0 1 1
6 6 0 0 1 1
3 4 0 0 1 1
6 6 0 0 1 1
3 4 0 0 1 1
1 3 0 0 1 1
6 4 0 0 1 1
4 6 0 0 0 0
104 0 0 2 1
3 1 0 0 1 1
3 4 0 0 1 1
5 5 0 0 1 1
2 3 0 0 1 1
6 6 0 0 1 1
9 5 0 0 1 1
1 1 0 0 1 1
8 7 0 0 1 1
3 6 0 0 1 1
113 1007 1006 2 2*
3 3 1 2 1 1
4 6 1 2 1 1
1 6 1 2 1 1
2 3 1 2 1 1
6 1 1 1 1 1
4 7 1 1 1 1
2 3 1 1 1 1
3 6 1 1 1 1
4 7 1 1 1 1
114 1007 1006 2 2*
3 3 2 2 1 1
6 6 2 2 1 1
4 6 2 2 1 1
3 3 2 2 1 1
6 2 1 2 1 1
4 7 1 2 1 1
2 2 1 2 1 1
3 3 1 2 1 1
4 4 1 2 1 1
115 1009 1008 1 2*
1 3 2 2 1 1
3 6 2 2 1 1
5 6 2 2 1 1
2 3 2 2 1 1
1 2 2 2 1 1
4 7 2 2 1 1
2 2 2 2 1 1
5 3 2 2 1 1
1 4 2 2 1 1
116 1011 1010 1 2*
3 3 2 2 1 1
2 6 2 2 1 1
5 6 2 2 1 1
3 3 2 2 1 1
1 2 2 2 1 1
4 7 2 2 1 1
1 2 2 2 1 1
3 3 2 2 1 1
4 4 2 2 1 1
117 1011 1010 2 1
3 1 1 1 1 1
4 1 1 1 1 1
4 5 1 1 1 1
3 2 1 1 1 1
6 5 1 1 1 1
5 5 1 1 1 1
4 4 1 1 1 1
4 4 1 1 1 1
4 4 1 1 1 1
9099 100 199 1 1
1 0 1 1 1 0
3 0 1 1 0 0
5 5 1 1 1 1
5 3 1 1 1 1
6 2 1 1 1 1
4 4 1 1 1 1
3 0 1 1 1 0
1 4 1 1 1 1
6 0 1 1 0 0
9098 100 199 2 unknown
1 0 2 2 1 0
4 0 2 2 0 0
6 6 2 2 1 1
2 4 2 2 1 1
1 5 2 2 1 1
7 8 2 2 1 1
3 0 2 2 1 0
6 4 2 2 1 1
7 0 2 2 0 0
9097 100 199 1 1
1 0 1 1 1 0
3 0 1 1 0 0
5 5 1 1 1 1
5 3 1 1 1 1
6 2 1 1 1 1
4 4 1 1 1 1
3 0 1 1 1 0
1 4 1 1 1 1
6 0 1 1 0 0
9003 102 103 1 2*
3 2 2 2 1 1
6 2 2 2 1 1
6 6 2 2 1 1
3 4 2 2 1 1
2 6 2 2 1 1
7 4 2 2 1 1
2 3 2 2 1 1
3 4 2 2 1 1
4 6 2 2 1 1
9004 102 103 1 1
3 1 2 1 1 1
6 3 2 1 1 1
6 6 2 1 1 1
3 3 2 1 1 1
6 6 1 1 1 1
4 3 1 1 1 1
4 1 1 1 1 1
5 6 1 1 1 1
6 4 1 1 1 1
9005 1 104 2 2*
3 1 2 2 1 1
6 4 2 2 1 1
6 5 2 2 1 1
3 3 2 2 1 1
2 6 2 2 1 1
7 5 2 2 1 1
2 1 2 2 1 1
3 7 2 2 1 1
4 6 2 2 1 1
9006 1 104 1 unknown
1 1 1 2 1 1
3 4 1 2 1 1
5 5 1 2 1 1
5 3 1 2 1 1
6 6 1 2 1 1
3 5 1 2 1 1
3 1 1 2 1 1
1 7 1 2 0 0
6 6 1 2 0 0
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